3WIR
Crystal structure of kojibiose phosphorylase complexed with glucose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 71.581, 104.464, 124.164 |
Unit cell angles | 68.83, 86.02, 90.06 |
Refinement procedure
Resolution | 46.260 - 2.050 |
R-factor | 0.19374 |
Rwork | 0.191 |
R-free | 0.25055 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h54 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.853 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.120 |
High resolution limit [Å] | 2.050 | 2.050 |
Number of reflections | 203954 | |
<I/σ(I)> | 14.5 | 2.3 |
Completeness [%] | 97.3 | 96.2 |
Redundancy | 3.8 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 5mM D-glucose, 5mM sodium phosphate, 10%(v/v) 2-propanol, 10%(w/v) PEG3350, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |