3W2X
Crystal structure of DNA uridine endonuclease Mth212
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2011-11-19 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 65 |
Unit cell lengths | 61.481, 61.481, 132.716 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 1.600 |
R-factor | 0.2144 |
Rwork | 0.213 |
R-free | 0.23870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fzi |
RMSD bond length | 0.009 |
RMSD bond angle | 1.228 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.660 |
High resolution limit [Å] | 1.600 | 3.450 | 1.600 |
Rmerge | 0.073 | 0.049 | 0.598 |
Number of reflections | 36324 | ||
<I/σ(I)> | 13.5 | 23.2 | 4.8 |
Completeness [%] | 97.0 | 74.3 | 100 |
Redundancy | 10.7 | 7.7 | 11 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 10% PEG3350, 50mM Magnesium formate dihydrate, VAPOR DIFFUSION, HANGING DROP, temperature 293K |