3VXJ
Dye-decolorizing peroxidase (DyP) complex with 2,6-dimethoxyphenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2009-11-25 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.167, 96.344, 49.778 |
Unit cell angles | 90.00, 106.71, 90.00 |
Refinement procedure
Resolution | 48.170 - 1.390 |
R-factor | 0.1809 |
Rwork | 0.180 |
R-free | 0.19460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3afv |
RMSD bond length | 0.008 |
RMSD bond angle | 1.243 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.410 |
High resolution limit [Å] | 1.390 | 3.770 | 1.390 |
Rmerge | 0.049 | 0.033 | 0.283 |
Number of reflections | 77992 | ||
<I/σ(I)> | 16.8 | ||
Completeness [%] | 95.7 | 82.5 | 94.9 |
Redundancy | 3.6 | 3.4 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 278 | PEG8000, pH 6.0, vapor diffusion, hanging drop, temperature 278K |