3VXD
Crystal structure of unsaturated glucuronyl hydrolase mutant D115N from Streptcoccus agalactiae
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL38B1 |
| Synchrotron site | SPring-8 |
| Beamline | BL38B1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-05-22 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 1 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 81.074, 95.914, 110.886 |
| Unit cell angles | 90.00, 104.06, 90.00 |
Refinement procedure
| Resolution | 27.480 - 2.000 |
| R-factor | 0.18488 |
| Rwork | 0.183 |
| R-free | 0.21938 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2zzr |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.999 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.940 |
| High resolution limit [Å] | 1.870 | 1.870 |
| Rmerge | 0.046 | 0.336 |
| Number of reflections | 133399 | |
| <I/σ(I)> | 38.8 | |
| Completeness [%] | 97.9 | 95.8 |
| Redundancy | 4.7 | 4.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293 | 1.5M ammonium sulphate, 0.1M Tris-HCl, pH 9.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
