3VSD
Crystal Structure of the K127A Mutant of O-Phosphoserine Sulfhydrylase Complexed with External Schiff Base of Pyridoxal 5'-Phosphate with O-Acetyl-L-Serine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-09 |
Detector | Bruker DIP-6040 |
Wavelength(s) | 0.90000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 75.646, 75.646, 275.784 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.090 |
R-factor | 0.2367 |
Rwork | 0.233 |
R-free | 0.30470 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.019 |
RMSD bond angle | 1.867 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | REFMAC (5.5.0109) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.090 | 5.700 | 2.090 |
Rmerge | 0.080 | 0.055 | 0.335 |
Number of reflections | 47287 | ||
<I/σ(I)> | 10.7 | ||
Completeness [%] | 97.7 | 98.6 | 95.1 |
Redundancy | 7.8 | 12 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | 296 | 0.1M HEPES sodium pH 6.8, 27% 2-propanol, 10% PEG 4000, 5mM O-acetyl-L-serine, 5mM 2-mercaptoethanol, VAPOR DIFFUSION, HANGING DROP, temperature 296K |