3VRO
Crystal structure of the tyrosine kinase binding domain of Cbl-c in complex with phospho-Src peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 90 |
Detector technology | CCD |
Collection date | 2007-12-02 |
Detector | Bruker DIP-6040 |
Wavelength(s) | 0.900 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 93.282, 108.493, 54.761 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.890 - 1.800 |
R-factor | 0.168 |
Rwork | 0.166 |
R-free | 0.21190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.024 |
RMSD bond angle | 1.895 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 0.082 | 0.033 | 0.538 |
Number of reflections | 26228 | ||
<I/σ(I)> | 21.609 | 53.425 | 3.283 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 5.2 | 4.7 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 10% PEG3350, 0.1M ammonium formate, 0.1M NDSB-201, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |