3VR3
Crystal structure of AMP-PNP bound A3B3 complex from Enterococcus hirae V-ATPase [bA3B3]
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-02-01 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 122.110, 124.130, 245.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.990 - 3.400 |
R-factor | 0.19997 |
Rwork | 0.198 |
R-free | 0.23914 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vr4 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.032 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.990 | 3.580 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.138 | 0.407 |
Number of reflections | 52024 | |
<I/σ(I)> | 10.6 | 4.6 |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.2 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 296 | 26% PEG 3350, 0.1M HEPES, 0.2M Sodium chloride, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K |