3VLD
Crystal structure of yeast proteasome interacting protein
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-02-16 |
Detector | Bruker DIP-6040 |
Wavelength(s) | 0.97916, 0.979475, 0.96424 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.402, 94.676, 129.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.520 - 2.050 |
R-factor | 0.18894 |
Rwork | 0.186 |
R-free | 0.23957 |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.081 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MLPHARE |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.470 | 2.120 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.056 | 0.345 |
Number of reflections | 66549 | |
<I/σ(I)> | 22 | 4.9 |
Completeness [%] | 99.8 | 99.5 |
Redundancy | 16.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 8% PEG 3000, 0.2M potassium phosphate, 0.1M Tris-HCl, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |