3VFI
Crystal Structure of a Metagenomic Thioredoxin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-12-19 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 30.219, 55.364, 54.435 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.750 |
Rwork | 0.201 |
R-free | 0.23270 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 1.102 |
RMSD bond angle | 0.007 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.4.0) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.760 |
High resolution limit [Å] | 1.730 | 4.692 | 1.730 |
Rmerge | 0.075 | 0.047 | 0.170 |
Number of reflections | 9812 | ||
<I/σ(I)> | 23.2 | ||
Completeness [%] | 97.2 | 94.2 | 72.7 |
Redundancy | 4.3 | 5.9 | 2.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.44 | 289 | 0.27M Tris-HCL pH 8.44 13.52% (w/v) PEG 1000 13.52% (w/v) PEG 3350 13.52% (w/v) MPD 0.03M NaF 0.03M NaBr 0.03M NaI 0.4uL@ 10mg/mL + 0.4uL, VAPOR DIFFUSION, SITTING DROP, temperature 289K |