3VFD
Human spastin AAA domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-12-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9775 |
Spacegroup name | P 65 |
Unit cell lengths | 88.500, 88.500, 88.600 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.250 - 3.301 |
R-factor | 0.2135 |
Rwork | 0.206 |
R-free | 0.27540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3b9p |
RMSD bond length | 0.007 |
RMSD bond angle | 1.184 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (AutoMR) |
Refinement software | PHENIX ((phenix.refine: 1.7.1_743)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.300 | 3.490 |
High resolution limit [Å] | 3.300 | 3.300 |
Rmerge | 0.116 | 0.598 |
Number of reflections | 5983 | |
<I/σ(I)> | 24.8 | 4.7 |
Completeness [%] | 99.7 | 98.3 |
Redundancy | 11.3 | 11.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 296 | 1.6M (NH3)2SO4, 0.1M MES monohydrate (pH 6.5),10% 1,4-dioxane and 4% benzamidine HCl, 1mM ATP, VAPOR DIFFUSION, HANGING DROP, temperature 296K |