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3V6K

Replication of N2,3-Ethenoguanine by DNA Polymerases

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]110
Detector technologyCCD
Collection date2011-11-04
DetectorMARMOSAIC 300
Spacegroup nameP 1 21 1
Unit cell lengths51.855, 110.953, 100.238
Unit cell angles90.00, 102.70, 90.00
Refinement procedure
Resolution48.900 - 3.600
R-factor0.234
Rwork0.229
R-free0.30300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3v6j
RMSD bond length0.011
RMSD bond angle1.596
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareREFMAC (5.6.0117)
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.630
High resolution limit [Å]3.5003.500
Rmerge0.1350.665
Number of reflections12944
<I/σ(I)>11.72.17
Completeness [%]100.0100
Redundancy3.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
17.4293200 uM Dpo4, 240 uM primer-template DNA complex, 5 mM MgCl2, 1 mM dCTP, 20 mM Tris-HCl (pH 7.4), 60 mM NaCl, 2% glycerol (v/v), and 5 mM -mercaptoethanol. Precipitant: 0.1M Tris-HCl (pH 7.4), 15% polyethylene glycol 3350 (w/v), 0.1 M Ca(CH3COO)2, and 2% glycerol (v/v), VAPOR DIFFUSION, HANGING DROP, temperature 293K

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