3V4G
1.60 Angstrom resolution crystal structure of an arginine repressor from Vibrio vulnificus CMCP6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-10 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97903 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 73.308, 73.308, 118.597 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.650 - 1.600 |
R-factor | 0.18246 |
Rwork | 0.182 |
R-free | 0.19787 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1XXB and 1F9N |
RMSD bond length | 0.008 |
RMSD bond angle | 1.602 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.063 | 0.514 |
Number of reflections | 25607 | |
<I/σ(I)> | 38.3 | 6.25 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14 | 14.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295 | protein: 7.3 mg/mL in 10 mM Tris-HCl pH 8.3, 0.25 M NaCl, 5 mM BME. Crystallization: The Classics II Suite (A9: 0.1 M Bis-Tris pH 5.5, 3 M NaCl). Cryo: 5M NaCl+50% sucrose, VAPOR DIFFUSION, SITTING DROP, temperature 295K |