3V1C
Crystal structure of de novo designed MID1-zinc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-26 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9180 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 25.312, 29.800, 105.412 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.292 - 1.129 |
R-factor | 0.1483 |
Rwork | 0.147 |
R-free | 0.17630 |
Structure solution method | Phaser |
Starting model (for MR) | 1yzm |
RMSD bond length | 0.013 |
RMSD bond angle | 1.241 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.3_927)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.292 | 1.140 |
High resolution limit [Å] | 1.129 | 1.130 |
Rmerge | 0.089 | 0.490 |
Number of reflections | 30296 | |
<I/σ(I)> | 31.4 | 2 |
Completeness [%] | 97.8 | 88.8 |
Redundancy | 7.3 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 1-2 microliter2 protein (20 mg/ml, 100 mM ammonium acetate buffer) mixed with 1 microliter crystallization buffer (0.1 M sodium citrate, pH 5.5, 1.25 M ammonium sulfate, 0.08 M K/Na tartrate), VAPOR DIFFUSION, HANGING DROP, temperature 293K |