3UGB
UbcH5c~Ubiquitin Conjugate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 113 |
Detector technology | CCD |
Collection date | 2011-08-09 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.027, 52.510, 53.114 |
Unit cell angles | 90.00, 101.07, 90.00 |
Refinement procedure
Resolution | 29.618 - 2.350 |
R-factor | 0.213 |
Rwork | 0.211 |
R-free | 0.25240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 3TGD AND 1UBQ |
RMSD bond length | 0.014 |
RMSD bond angle | 1.071 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHENIX (1.7.2_869) |
Refinement software | PHENIX ((phenix.refine: 1.7.2_869)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.510 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.048 | 0.204 |
Number of reflections | 9319 | |
<I/σ(I)> | 19.2 | 5 |
Completeness [%] | 97.1 | 78.2 |
Redundancy | 4.89 | 3.11 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.2M tri-potassium citrate, 20% PEG 3350, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 298K |