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3UFB

Crystal structure of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 4A
Synchrotron sitePAL/PLS
Beamline4A
Detector technologyCCD
Collection date2008-11-12
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameP 41 21 2
Unit cell lengths78.899, 78.899, 165.802
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution5.999 - 1.800
R-factor0.1844
Rwork0.181
R-free0.21540
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle1.006
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSOLVE
Refinement softwarePHENIX ((phenix.refine: 1.7_650))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.800
Number of reflections48972
Completeness [%]99.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529120 % (w/v) polyethylene glycol 8,000, 0.1 M at Hepes pH 7.5 , VAPOR DIFFUSION, HANGING DROP, temperature 291K
2VAPOR DIFFUSION, HANGING DROP7.529124 % (w/v) polyethyleneglycol 3350, 0.1 M 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid at pH 7.5 and 10 mM -mercaptoethanol , VAPOR DIFFUSION, HANGING DROP, temperature 291K

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