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3U7E

Crystal structure of mPNKP catalytic fragment (D170A)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2010-07-07
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97949
Spacegroup nameP 1 21 1
Unit cell lengths42.820, 63.190, 68.120
Unit cell angles90.00, 88.23, 90.00
Refinement procedure
Resolution46.300 - 1.700
R-factor0.1627
Rwork0.161
R-free0.19500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yj5
RMSD bond length0.009
RMSD bond angle1.160
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.7.2_869)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.30046.3001.750
High resolution limit [Å]1.70010.0001.700
Rmerge0.0650.0250.534
Number of reflections400132123316
<I/σ(I)>13.9138.52.78
Completeness [%]99.896.499.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729820% PEG 3350, pH 7, vapor diffusion, hanging drop, temperature 298K

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