3U7E
Crystal structure of mPNKP catalytic fragment (D170A)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.820, 63.190, 68.120 |
Unit cell angles | 90.00, 88.23, 90.00 |
Refinement procedure
Resolution | 46.300 - 1.700 |
R-factor | 0.1627 |
Rwork | 0.161 |
R-free | 0.19500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yj5 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.160 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.2_869) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.300 | 46.300 | 1.750 |
High resolution limit [Å] | 1.700 | 10.000 | 1.700 |
Rmerge | 0.065 | 0.025 | 0.534 |
Number of reflections | 40013 | 212 | 3316 |
<I/σ(I)> | 13.91 | 38.5 | 2.78 |
Completeness [%] | 99.8 | 96.4 | 99.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 20% PEG 3350, pH 7, vapor diffusion, hanging drop, temperature 298K |