3U69
Unliganded wild-type human thrombin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-29 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.934 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.555, 72.995, 83.042 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.304 - 1.550 |
R-factor | 0.1346 |
Rwork | 0.133 |
R-free | 0.16700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vzq |
RMSD bond length | 0.010 |
RMSD bond angle | 1.292 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.15) |
Phasing software | PHASER (2.1.1) |
Refinement software | PHENIX (1.7_650) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.825 | 72.995 | 1.630 |
High resolution limit [Å] | 1.550 | 4.900 | 1.550 |
Rmerge | 0.059 | 0.348 | |
Total number of observations | 23010 | 53745 | |
Number of reflections | 50373 | ||
<I/σ(I)> | 22.7 | 6.9 | 2.2 |
Completeness [%] | 98.1 | 99.6 | 96.6 |
Redundancy | 9.9 | 12.9 | 7.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 50mM Tris, 50mM Bicine, 30mM NaF, 30mM NaBr, 30mM NaI, 11.5% MPD, 11.5% PEG 1000, 11.5% PEG 3350 , pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |