3U5L
Crystal Structure of the first bromodomain of human BRD4 in complex with a benzo-triazepine ligand (BzT-7)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-07-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9173 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.360, 44.130, 78.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.300 - 1.390 |
R-factor | 0.1124 |
Rwork | 0.111 |
R-free | 0.14190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oss |
RMSD bond length | 0.013 |
RMSD bond angle | 1.700 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.300 | 28.514 | 1.460 |
High resolution limit [Å] | 1.388 | 4.390 | 1.390 |
Rmerge | 0.063 | 0.030 | 0.239 |
Total number of observations | 6776 | 25420 | |
Number of reflections | 25967 | ||
<I/σ(I)> | 18.6 | 19.7 | 3.1 |
Completeness [%] | 96.9 | 99.5 | 96.9 |
Redundancy | 6.7 | 7.1 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.20M Na(malonate), 0.1M BTProp pH 7.5, 20.0% PEG 3350, 10.0% EtGly, VAPOR DIFFUSION, SITTING DROP, temperature 277K |