3U4E
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-08-14 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.026, 103.545, 186.373 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.693 - 2.185 |
R-factor | 0.1845 |
Rwork | 0.182 |
R-free | 0.23360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3u2s |
RMSD bond length | 0.009 |
RMSD bond angle | 1.094 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.2_869)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.240 |
High resolution limit [Å] | 2.190 | 5.400 | 2.190 |
Rmerge | 0.054 | 0.339 | |
Number of reflections | 67917 | ||
<I/σ(I)> | 18.7 | 2.4 | |
Completeness [%] | 92.0 | 99 | 68.7 |
Redundancy | 4.1 | 4.7 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 13% (w/v) PEG 3350, 11% (v/v) 2-methyl-2,4-pentanediol, 0.2 M lithium sulfate, 0.1 M imidazole pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |