3TV2
Structure of a class II fumarate hydratase from Burkholderia pseudomallei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-04-10 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 147.180, 147.180, 208.280 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.200 - 2.100 |
R-factor | 0.15666 |
Rwork | 0.156 |
R-free | 0.17592 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yfe |
RMSD bond length | 0.011 |
RMSD bond angle | 1.344 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 99.990 | 2.150 | |
High resolution limit [Å] | 2.100 | 9.390 | 2.100 |
Rmerge | 0.071 | 0.017 | 0.509 |
Number of reflections | 76331 | ||
<I/σ(I)> | 22.66 | 76.54 | 3.72 |
Completeness [%] | 97.9 | 86.7 | 99.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289 | 0.2 M sodium citrate, 0.1 M Bis-Tris propane, pH 6.5, 20% PEG3350, protein 18.9 mg/mL, 25% ethylene glycol cryoprotectant, TargetDB ID: BupsA.00047.a.D13 PD00173, VAPOR DIFFUSION, HANGING DROP, temperature 289K |