3TS4
Human MMP12 in complex with L-glutamate motif inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.99190 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 70.090, 63.650, 37.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.976 - 1.587 |
R-factor | 0.1797 |
Rwork | 0.178 |
R-free | 0.20300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lik |
RMSD bond length | 0.016 |
RMSD bond angle | 1.612 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.000 | 33.000 | 1.680 |
High resolution limit [Å] | 1.590 | 4.720 | 1.590 |
Rmerge | 0.099 | 0.019 | 0.632 |
Number of reflections | 23208 | ||
<I/σ(I)> | 16.2 | 40.16 | 2.89 |
Completeness [%] | 99.6 | 94.7 | 98.8 |
Redundancy | 7.67 | 6.86 | 7.58 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293 | MMP12 AT 0.4 mM co-crystallization, with 100mM AHA and non-chelating inhibitor EEG at 1.1 mM with reservoir: 27% PEG 10K, 0.1M glycine. AHA removed during cryo-soak for 5 min in 30% MPEG2K, 10% ethylene glycol, 200 mM imidazole malate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |