3TDQ
Crystal structure of a fimbrial biogenesis protein PilY2 (PilY2_PA4555) from Pseudomonas aeruginosa PAO1 at 2.10 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-20 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97901,0.91162,0.97876 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.156, 53.582, 76.667 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.556 - 2.100 |
R-factor | 0.1882 |
Rwork | 0.187 |
R-free | 0.21500 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.060 |
Data reduction software | XDS |
Data scaling software | XSCALE (December 6, 2010) |
Phasing software | SHELX |
Refinement software | BUSTER-TNT (2.8.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.556 | 25.556 | 2.170 |
High resolution limit [Å] | 2.100 | 4.510 | 2.100 |
Rmerge | 0.049 | 0.024 | 0.330 |
Number of reflections | 12753 | 2329 | 1968 |
<I/σ(I)> | 10.94 | 28.4 | 2.4 |
Completeness [%] | 97.4 | 95.5 | 86.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 15.00% Glycerol, 0.17M NH4OAc, 25.50% PEG-4000, 0.1M Acetate pH 4.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |