3T4C
Crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Burkholderia ambifaria
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-12 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.130, 129.500, 169.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.330 - 1.950 |
R-factor | 0.172 |
Rwork | 0.170 |
R-free | 0.20300 |
Structure solution method | MR |
Starting model (for MR) | 3sz8 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.494 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.940 | 2.000 | |
High resolution limit [Å] | 1.950 | 8.720 | 1.950 |
Rmerge | 0.087 | 0.036 | 0.401 |
Number of reflections | 79104 | 1027 | 5228 |
<I/σ(I)> | 12.71 | 27.2 | 2.4 |
Completeness [%] | 98.9 | 97.8 | 89.8 |
Redundancy | 6.1 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 290 | EBS internal tracking number 224045c2 WIZARD 3/4 C2. 24%(w/v) PEG 1500, 20%(v/v) Glycerol, BuamA.00102.a.A1 PS01117 at 74 mg/mL, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |