Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SKZ

Crystal structure of the 2'- deoxyguanosine riboswitch bound to guanosine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2010-04-13
DetectorADSC QUANTUM 315
Wavelength(s)1.075
Spacegroup nameP 21 21 21
Unit cell lengths34.806, 47.208, 227.279
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.605
R-factor0.2221
Rwork0.219
R-free0.27510
RMSD bond length0.006
RMSD bond angle1.000
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.7_650))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.690
High resolution limit [Å]2.6002.600
Rmerge0.0660.209
Number of reflections11024
<I/σ(I)>397.8
Completeness [%]90.387.2
Redundancy8.48.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52930.05 M Na-succinate, ~3.0 M ammonium sulfate, 0.5 mM spermine and 20 mM magnesium chloride, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon