Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3S5X

Structure of the cyanobacterial Oscillatoria Agardhii Agglutinin (OAA) in complex with a3,a6 mannopentaose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]93
Detector technologyIMAGE PLATE
Collection date2010-07-01
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54
Spacegroup nameP 21 21 21
Unit cell lengths35.192, 49.070, 69.247
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.190 - 1.650
R-factor0.18156
Rwork0.178
R-free0.21874
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3s5v
RMSD bond length0.012
RMSD bond angle1.532
Data reduction softwared*TREK
Data scaling softwared*TREK
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0044)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.1901.710
High resolution limit [Å]1.6501.650
Rmerge0.0560.118
Number of reflections13024
<I/σ(I)>27.513.2
Completeness [%]96.487.4
Redundancy12.028.91
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP82982.0 M (NH4)SO4 and 0.1 M Tris-HCl (pH 8.5) with protein and 3,6-mannopentaose at molar ratios of 1:2, 1:3, or 1:4 (the protein concentration kept at 40 mg/ml), VAPOR DIFFUSION, SITTING DROP, temperature 298K

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon