3S40
The crystal structure of a diacylglycerol kinases from Bacillus anthracis str. Sterne
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-13 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97924 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.608, 130.758, 72.794 |
Unit cell angles | 90.00, 115.04, 90.00 |
Refinement procedure
Resolution | 43.231 - 2.100 |
R-factor | 0.1778 |
Rwork | 0.175 |
R-free | 0.23780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qvl |
RMSD bond length | 0.007 |
RMSD bond angle | 1.077 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.000 | 2.140 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.090 | 0.656 |
Number of reflections | 62575 | |
<I/σ(I)> | 16.7 | 1.4 |
Completeness [%] | 99.9 | 99.4 |
Redundancy | 4.9 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.8 | 289 | 0.1M Bis-Tris, 0.4M NH4Cl, 16% PEG 3350, 4% Jeffamine M-600, pH 5.8, VAPOR DIFFUSION, SITTING DROP, temperature 289K |