3S3D
Structure of Thermus thermophilus cytochrome ba3 oxidase 480s after Xe depressurization
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-11 |
Detector | ADSC QUANTUM 315 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 110.030, 110.030, 170.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 92.410 - 3.750 |
R-factor | 0.245 |
Rwork | 0.243 |
R-free | 0.29300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xme |
RMSD bond length | 0.015 |
RMSD bond angle | 1.487 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.15) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 92.410 | 3.950 |
High resolution limit [Å] | 3.750 | 3.750 |
Rmerge | 0.475 | |
Number of reflections | 11319 | |
<I/σ(I)> | 17.9 | 1.5 |
Completeness [%] | 99.9 | 100 |
Redundancy | 25.9 | 26.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7 | 297 | 12-17% PEG 2000, 0-200mM KCl, 15-60mM bis-Tris pH 7.0, 6.5mM nonyl-B-D-glucopyranoside, vapor diffusion, hanging drop, temperature 297K |