Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3S3A

Structure of Thermus thermophilus cytochrome ba3 oxidase 120s after Xe depressurization

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2009-12-11
DetectorADSC QUANTUM 315
Wavelength(s)1.127
Spacegroup nameP 43 21 2
Unit cell lengths110.290, 110.290, 170.270
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution92.568 - 4.250
R-factor0.2815
Rwork0.279
R-free0.32960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xme
RMSD bond length0.020
RMSD bond angle1.646
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.15)
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]92.568110.2904.480
High resolution limit [Å]4.25013.4404.250
Rmerge0.1250.505
Total number of observations576830674
Number of reflections7893
<I/σ(I)>13.93.41.4
Completeness [%]99.895.3100
Redundancy26.619.727.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729712-17% PEG 2000, 0-200mM KCl, 15-60mM bis-Tris pH 7.0, 6.5mM nonyl-B-D-glucopyranoside, vapor diffusion, hanging drop, temperature 297K

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon