Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3S2N

Crystal structure of dipeptidase from Streptomyces coelicolor complexed with phosphinate pseudodipeptide L-Tyr-D-Asp

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4A
Synchrotron siteNSLS
BeamlineX4A
Temperature [K]100
Detector technologyCCD
Collection date2009-08-21
DetectorADSC QUANTUM 4
Wavelength(s)0.97915
Spacegroup nameP 31 2 1
Unit cell lengths96.922, 96.922, 104.711
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.228 - 1.400
R-factor0.155
Rwork0.155
R-free0.16390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3k5x
RMSD bond length0.006
RMSD bond angle1.115
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareBALBES
Refinement softwarePHENIX ((phenix.refine: 1.6.4_486))
Data quality characteristics
 Overall
Low resolution limit [Å]32.228
High resolution limit [Å]1.400
Number of reflections108779
Completeness [%]97.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529322% Polyacrylic acid, 0.1M hepes, 0.02M magnesium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon