3S2H
RNA Polymerase II Initiation Complex with a 6-nt RNA containing a 2[prime]-iodo ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-02-03 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 165.533, 221.608, 194.056 |
Unit cell angles | 90.00, 99.67, 90.00 |
Refinement procedure
Resolution | 49.810 - 3.300 |
R-factor | 0.1929 |
Rwork | 0.191 |
R-free | 0.23960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nvq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.210 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | BUSTER-TNT (BUSTER 2.8.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.420 |
High resolution limit [Å] | 3.300 | 7.100 | 3.300 |
Rmerge | 0.114 | 0.035 | 0.847 |
Number of reflections | 100015 | ||
<I/σ(I)> | 6.9 | ||
Completeness [%] | 96.5 | 99.9 | 77.6 |
Redundancy | 6.8 | 7.5 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6 | 293 | 390mM (NH4)2HPO4/NaH2PO4, pH 5.9-6.1, 50mM dioxane, 9-11% PEG 6,000, 15mM DTT, vapor diffusion, temperature 293K |