Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RYL

Dimerization domain of Vibrio parahemolyticus VopL

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date2011-03-29
DetectorADSC QUANTUM 210
Spacegroup nameP 21 21 21
Unit cell lengths56.930, 90.490, 101.860
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.650 - 3.100
R-factor0.2459
Rwork0.240
R-free0.29360
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle1.512
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXS
Refinement softwarePHENIX ((phenix.refine: 1.7_650))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.6503.200
High resolution limit [Å]3.1003.100
Rmerge0.1220.426
Number of reflections10025
<I/σ(I)>20.562.37
Completeness [%]99.599.9
Redundancy32.7534.86
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.527713-15% PEG3350, 0.2 M sodium fluoride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon