Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RU6

1.8 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase (pyrF) from Campylobacter jejuni subsp. jejuni NCTC 11168

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2011-04-21
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameP 1 21 1
Unit cell lengths44.598, 108.308, 97.707
Unit cell angles90.00, 95.73, 90.00
Refinement procedure
Resolution29.120 - 1.800
R-factor0.17005
Rwork0.168
R-free0.20267
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)balbes
RMSD bond length0.011
RMSD bond angle1.503
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareBALBES
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.830
High resolution limit [Å]1.8001.800
Rmerge0.0500.564
Number of reflections84340
<I/σ(I)>18.411.86
Completeness [%]98.497.5
Redundancy2.62.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5295Protein: 7.3 mg/mL in 10 mM Tris/HCl pH 8.3, 0.25 M NaCl, 5 mM BME. Crystallization condition: The PACT suite (F3 (63): 0.2 M Sodium iodide, 0.1 M Bis Tris propane pH 6.5, 20 % w/v PEG3350). Mixed 1:1 v/v , VAPOR DIFFUSION, SITTING DROP, temperature 295K

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon