3RSD
STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU RUH2R |
Temperature [K] | 277 |
Detector technology | AREA DETECTOR |
Collection date | 1995-08-28 |
Detector | SIEMENS |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 30.520, 38.400, 53.310 |
Unit cell angles | 90.00, 105.70, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rph |
RMSD bond length | 0.011 |
RMSD bond angle | 17.100 * |
Data reduction software | XCALIBRE |
Data scaling software | XDS |
Phasing software | AMoRE |
Refinement software | TNT (5E) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.700 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.019 * | 0.055 * |
Total number of observations | 28480 * | |
Number of reflections | 15756 | |
<I/σ(I)> | 31 | |
Completeness [%] | 89.0 * | 75 |
Redundancy | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | batch method | 5.2 | 20 * | LYOPHILIZED D121N RNASE A WAS DISSOLVED IN UNBUFFERED WATER TO A CONCENTRATION OF 60MG/ ML. CRYSTALLIZATION WAS PERFORMED IN SMALL SILICONIZED TUBES USING THE BATCH METHOD. A SOLUTION (25UL) OF THE ENZYME WAS MIXED WITH AN EQUAL VOLUME OF 95% (V/V) 2-METHYL-2,4-PENTANEDIOL IN 0.10 M MES BUFFER, PH 5.2. CRYSTALS APPEARED WITHIN SEVERAL MONTHS., batch method |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | enzyme | 30 (mg/ml) | |
2 | 1 | 1 | MPD | 47.5 (%(v/v)) | |
3 | 1 | 1 | MES-NaOH | 0.05 (M) |