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3RSD

STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]277
Detector technologyAREA DETECTOR
Collection date1995-08-28
DetectorSIEMENS
Spacegroup nameP 1 21 1
Unit cell lengths30.520, 38.400, 53.310
Unit cell angles90.00, 105.70, 90.00
Refinement procedure
Resolution30.000 - 1.600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1rph
RMSD bond length0.011
RMSD bond angle17.100

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Data reduction softwareXCALIBRE
Data scaling softwareXDS
Phasing softwareAMoRE
Refinement softwareTNT (5E)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.700
High resolution limit [Å]1.6001.600
Rmerge0.019

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0.055

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Total number of observations28480

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Number of reflections15756
<I/σ(I)>31
Completeness [%]89.0

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75
Redundancy1.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1batch method5.220

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LYOPHILIZED D121N RNASE A WAS DISSOLVED IN UNBUFFERED WATER TO A CONCENTRATION OF 60MG/ ML. CRYSTALLIZATION WAS PERFORMED IN SMALL SILICONIZED TUBES USING THE BATCH METHOD. A SOLUTION (25UL) OF THE ENZYME WAS MIXED WITH AN EQUAL VOLUME OF 95% (V/V) 2-METHYL-2,4-PENTANEDIOL IN 0.10 M MES BUFFER, PH 5.2. CRYSTALS APPEARED WITHIN SEVERAL MONTHS., batch method
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111enzyme30 (mg/ml)
211MPD47.5 (%(v/v))
311MES-NaOH0.05 (M)

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PDB entries from 2024-10-30

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