3RPD
The structure of a B12-independent methionine synthase from Shewanella sp. W3-18-1 in complex with Selenomethionine.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-10-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97942 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.099, 89.371, 86.526 |
Unit cell angles | 90.00, 92.45, 90.00 |
Refinement procedure
Resolution | 36.500 - 1.500 |
R-factor | 0.1649 |
Rwork | 0.164 |
R-free | 0.18900 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.425 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MLPHARE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 4.070 | 1.500 |
Rmerge | 0.088 | 0.071 | 0.425 |
Number of reflections | 111443 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 99.2 | 98.3 | 98.8 |
Redundancy | 4.4 | 4.4 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.1M Imidazole:HCl pH 8.0, 1.0M Sodium Citrate Tribasic, VAPOR DIFFUSION, SITTING DROP, temperature 289K |