3RC9
Crystal Structure of the K102A mutant of KijD10, a 3-ketoreductase from Actinomadura kijaniata in complex with TDP-benzene and NADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-01-22 |
Detector | Bruker Platinum 135 |
Wavelength(s) | 1.5418 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 72.975, 104.464, 145.021 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.000 - 1.910 |
R-factor | 0.20627 |
Rwork | 0.204 |
R-free | 0.24525 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | model generated using binary complex pdb entry 3RBV |
RMSD bond length | 0.011 |
RMSD bond angle | 2.337 |
Data reduction software | SAINT |
Data scaling software | SADABS |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0066) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 84.760 | 2.010 |
High resolution limit [Å] | 1.910 | 1.910 |
Rmerge | 0.067 | 0.254 |
Number of reflections | 37962 | |
<I/σ(I)> | 12.9 | 2.2 |
Completeness [%] | 91.1 | 73.1 |
Redundancy | 4.1 | 1.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 1.0 M sodium/potassium phosphate, 100 mM HEPPS, 5 mM NADP, 5 mM TDP-benzene, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |