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3RA8

Structural studies of AAV8 capsid transitions associated with endosomal trafficking

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]113
Detector technologyIMAGE PLATE
DetectorMAR scanner 300 mm plate
Wavelength(s)1.00
Spacegroup nameP 63 2 2
Unit cell lengths257.940, 257.940, 448.690
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.000 - 2.700
R-factor0.246
Rwork0.245
R-free0.25040
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAMoRE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.800
High resolution limit [Å]2.7002.700
Number of reflections185894
Completeness [%]77.957.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.529320 mM Tris pH 7.5, 4% PEG 8000, 1M NaCl. Crystals presoaked in pH 5.5 cryosolvent for 24 hours before data collection, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-11-06

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