3R9W
Crystal structure of Era in complex with MgGDPNP and nucleotides 1506-1542 of 16S ribosomal RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-29 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.946, 85.604, 67.184 |
Unit cell angles | 90.00, 111.20, 90.00 |
Refinement procedure
Resolution | 25.913 - 2.050 |
R-factor | 0.1908 |
Rwork | 0.188 |
R-free | 0.24270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3iev |
RMSD bond length | 0.008 |
RMSD bond angle | 1.167 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.6.4_486) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.120 |
High resolution limit [Å] | 2.050 | 4.410 | 2.050 |
Rmerge | 0.078 | 0.054 | 0.665 |
Number of reflections | 27524 | ||
<I/σ(I)> | 14.4 | 25.62 | 2.18 |
Completeness [%] | 93.7 | 99.2 | 72.9 |
Redundancy | 5.5 | 6.2 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.2 | 292 | 0.2M calcium acetate, 40% (v/v) MPD, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 292K |