3R2P
2.2 Angstrom Crystal Structure of C Terminal Truncated Human Apolipoprotein A-I Reveals the Assembly of HDL by Dimerization.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4C |
Synchrotron site | NSLS |
Beamline | X4C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-04-15 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.91994 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 108.333, 30.178, 69.576 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.788 - 2.204 |
R-factor | 0.2356 |
Rwork | 0.230 |
R-free | 0.28000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Use the Se-Met derivative to obtain the starting model from SAD experiment. |
RMSD bond length | 0.007 |
RMSD bond angle | 0.958 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.6.2_432) |
Refinement software | PHENIX ((phenix.refine: 1.6.2_432)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.074 | 0.395 |
Number of reflections | 11930 | |
<I/σ(I)> | 21.017 | 2.95 |
Completeness [%] | 98.2 | 89.4 |
Redundancy | 6.4 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 298 | 0.15M potassium bromide, 30% PEG 2000 MME, pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |