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3R1Z

Crystal structure of NYSGRC enolase target 200555, a putative dipeptide epimerase from Francisella philomiragia : Complex with L-Ala-L-Glu and L-Ala-D-Glu

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]98
Detector technologyCCD
DetectorRAYONIX MX225HE
Wavelength(s)0.97905
Spacegroup nameP 41 21 2
Unit cell lengths121.190, 121.190, 149.020
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.690 - 1.900
R-factor0.1585
Rwork0.157
R-free0.18540
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.008
RMSD bond angle1.242
Data reduction softwareMOSFLM
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX (1.7_650)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.000
High resolution limit [Å]1.9001.900
Rmerge0.0970.380
Number of reflections85703
<I/σ(I)>16.45.8
Completeness [%]97.992.5
Redundancy12.512.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1vapour diffusion, sitting drop5.6294Protein: 10 mM HEPES pH 7.5, 150 mM Nacl, 10% glycerol, 5 mM DTT; Reservoir: 2M Ammonium Sulfate, 100 mM NaCitrate, 200 mM KNaTartrate; Soak: 2.2 M Ammonium sulfate, 100 mM MES pH 6.0, 18% glycerol, 50mM MgSO4, 25 mM L-Ala-L-Glu, 30 min, vapour diffusion, sitting drop, temperature 294K

220113

PDB entries from 2024-05-22

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