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3R0N

Crystal Structure of the Immunoglobulin variable domain of Nectin-2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2011-01-28
DetectorADSC QUANTUM 315
Wavelength(s)0.9793
Spacegroup nameP 41 21 2
Unit cell lengths57.964, 57.964, 67.544
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.900 - 1.300
R-factor0.1534
Rwork0.152
R-free0.17330
Structure solution method1NEU
RMSD bond length0.009
RMSD bond angle1.310
Data reduction softwareHKL-3000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.90050.0001.320
High resolution limit [Å]1.3003.5301.300
Rmerge0.0490.0230.535
Number of reflections28989
<I/σ(I)>12.3
Completeness [%]100.099.699.9
Redundancy14.214.37.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52980.2 M MgCl2.6H20, 0.1M TRIS hydrochloride pH 8.5, 30% PEG 4000, Vapor diffusion, Sitting drop, temperature 298K

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