3QO1
Monoclinic form of IgG1 Fab fragment (apo form) sharing same Fv as IgA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 108 |
Detector technology | IMAGE PLATE |
Collection date | 2009-11-26 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.297, 67.214, 68.952 |
Unit cell angles | 90.00, 103.39, 90.00 |
Refinement procedure
Resolution | 19.280 - 2.400 |
R-factor | 0.1687 |
Rwork | 0.166 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2eh7 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.280 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.9) |
Phasing software | AMoRE |
Refinement software | BUSTER-TNT |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.214 | 19.284 | 2.530 |
High resolution limit [Å] | 2.400 | 7.590 | 2.400 |
Rmerge | 0.027 | 0.497 | |
Rmeas | 0.032 | 0.591 | |
Rpim | 0.017 | 0.316 | |
Total number of observations | 1888 | 8764 | |
Number of reflections | 18623 | ||
<I/σ(I)> | 11.2 | 30 | 2.7 |
Completeness [%] | 99.7 | 92 | 100 |
Redundancy | 3.3 | 3.3 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1M Na citrate, 20% isopropanol, 16% PEG 4000, pH 5.5, vapor diffusion, sitting drop, temperature 293K |