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3QN6

Crystal Structures of Escherichia coli Aspartate Aminotransferase Reconstituted with 1-Deaza-Pyridoxal 5'-Phosphate: Internal Aldimine and Stable L-Aspartate External Aldimine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Detector technologyCCD
DetectorMARMOSAIC 325 mm CCD
Spacegroup nameC 2 2 21
Unit cell lengths84.749, 154.678, 79.147
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.229 - 1.790
R-factor0.1533
Rwork0.151
R-free0.18800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.017
RMSD bond angle1.486
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.15)
Phasing softwareMOLREP
Refinement softwarePHENIX (1.6.4_486)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.57439.5741.840
High resolution limit [Å]1.7908.0101.790
Rmerge0.0240.428
Total number of observations141011977
Number of reflections48807
<I/σ(I)>10.726.41.7
Completeness [%]99.179.799.7
Redundancy3.42.93.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52932 L of protein (15-20 mg/ml, 50 mM TEA, pH 7.5, 100 mM KCL, 2 mM DTT, 10 M deaza-PLP) mixed with 2 L reservoir buffer (53-60% saturated ammonium sulfate and 50 mM TEA, pH 7.5), VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-04-24

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