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3QJM

Structural flexibility of Shank PDZ domain is important for its binding to different ligands

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NW12A
Synchrotron sitePhoton Factory
BeamlineAR-NW12A
Temperature [K]100
Detector technologyCCD
Wavelength(s)1.0000
Spacegroup nameP 41 21 2
Unit cell lengths57.625, 57.625, 144.042
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.368 - 2.311
R-factor0.2362
Rwork0.235
R-free0.26700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.135
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.6.1_357))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.380
High resolution limit [Å]2.3002.300
Number of reflections10106
Completeness [%]89.583.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5294100mM sodium acetate(pH 5.5-6.0), 0.8M lithium sulfate, 0.7M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 294K

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PDB entries from 2024-09-04

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