3QI7
Crystal structure of a Putative transcriptional regulator (YP_001089212.1) from Clostridium difficile 630 at 1.86 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-05 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.886, 102.479, 154.102 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.622 - 1.860 |
R-factor | 0.1913 |
Rwork | 0.190 |
R-free | 0.22020 |
Structure solution method | SAD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.307 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.622 | 48.620 | 1.930 |
High resolution limit [Å] | 1.860 | 4.000 | 1.860 |
Rmerge | 0.099 | 0.050 | 1.041 |
Number of reflections | 68584 | 7215 | 7100 |
<I/σ(I)> | 10.73 | 27.7 | 1.65 |
Completeness [%] | 99.8 | 98.9 | 100 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.96 | 277 | 30.00% polyethylene glycol 4000, 0.20M ammonium acetate, 0.1M sodium acetate pH 4.96, Additive: 0.001 M spermine, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |