3QFQ
Asymmetric Assembly of Merkel Cell Polyomavirus Large T-antigen Origin Binding Domains at the Viral Origin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.075 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 80.400, 171.340, 51.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.157 - 2.900 |
R-factor | 0.2282 |
Rwork | 0.225 |
R-free | 0.28580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ntc |
RMSD bond length | 0.003 |
RMSD bond angle | 0.710 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.6.4_486)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.000 | 3.060 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.131 | 0.688 |
Number of reflections | 15228 | |
<I/σ(I)> | 10.8 | 3.5 |
Completeness [%] | 91.8 | |
Redundancy | 13 | 13.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.1 | 277 | 19-21% PEG 3350, 0.2M Lithium Acetate, 50 mM Tris pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 277K |