3Q9W
Crystal structure of human CK2 alpha in complex with emodin at pH 8.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-03-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.972937 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.337, 45.619, 62.613 |
Unit cell angles | 90.00, 111.88, 90.00 |
Refinement procedure
Resolution | 58.120 - 1.700 |
R-factor | 0.173 |
Rwork | 0.170 |
R-free | 0.22340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pvr |
RMSD bond length | 0.023 |
RMSD bond angle | 2.032 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.25) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 58.124 | 58.302 | 1.790 |
High resolution limit [Å] | 1.700 | 5.380 | 1.700 |
Rmerge | 0.062 | 0.033 | 0.305 |
Rmeas | 0.040 | 0.408 | |
Rpim | 0.023 | 0.267 | |
Total number of observations | 3091 | 5230 | |
Number of reflections | 30551 | ||
<I/σ(I)> | 14.3 | 29.4 | 2.7 |
Completeness [%] | 90.3 | 94.7 | 58.1 |
Redundancy | 2.7 | 2.9 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 30% PEG 4000, 0.2M lithium sulfate, 0.1M TrisHCl, pH 8.5, vapor diffusion, sitting drop, temperature 293K |