3Q7U
Structure of Mtb 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase (IspD) complexed with CTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-08-12 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.214, 76.756, 131.538 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.378 - 2.100 |
R-factor | 0.1906 |
Rwork | 0.188 |
R-free | 0.23560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i52 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.145 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | PHENIX (1.6.4_486) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.430 | 42.430 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.096 | 0.053 | 0.420 |
Total number of observations | 27403 | 26560 | |
Number of reflections | 33407 | ||
<I/σ(I)> | 8.7 | 21.4 | 2.7 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 8.03 | 7.69 | 8.01 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.4M NaH2PO4, 1.6M K2HPO4, 0.1M imidazole, 0.2M NaCl, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K |