Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3Q5V

The structure of inorganic pyrophosphatase from Thermococcus Thioreducens in complex with magnesium and sulfate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2008-09-15
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.00
Spacegroup nameH 3 2
Unit cell lengths114.490, 114.490, 148.600
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.028 - 1.290
R-factor0.1219
Rwork0.120
R-free0.15520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ude
RMSD bond length0.010
RMSD bond angle1.351
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwarePHENIX (1.6.4_486)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.310
High resolution limit [Å]1.2602.7101.260
Rmerge0.0580.0510.256
Number of reflections85157
<I/σ(I)>27.7
Completeness [%]84.699.414.6
Redundancy8.710.91.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8298Tris, Bicine, NaCl, magnesium sulfate, PEG MME 550, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon