3Q0D
Crystal structure of SUVH5 SRA- hemi methylated CG DNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 42 |
Unit cell lengths | 76.379, 76.379, 74.254 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.095 - 2.370 |
R-factor | 0.2265 |
Rwork | 0.225 |
R-free | 0.26280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SRA Molecule from the SUVH5 SRA-fully methylated Cg DNA crystallized in space group P42212 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.378 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP (MR) |
Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 20.000 |
High resolution limit [Å] | 2.370 |
Rmerge | 0.070 |
Number of reflections | 17234 |
<I/σ(I)> | 30.1 |
Completeness [%] | 98.8 |
Redundancy | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 19% PEG4000, 100 mM MES, pH 6.5, 200 mM NaCl and 3 mM spermine, VAPOR DIFFUSION, SITTING DROP, temperature 291K |