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3Q0C

Crystal structure of SUVH5 SRA-fully methylated CG DNA complex in space group P6122

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-E
Synchrotron siteAPS
Beamline21-ID-E
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameP 61 2 2
Unit cell lengths104.462, 104.462, 176.691
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.847 - 2.657
R-factor0.2532
Rwork0.251
R-free0.30340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3q0b
RMSD bond length0.006
RMSD bond angle1.021
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP (MR)
Refinement softwarePHENIX ((phenix.refine))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.740
High resolution limit [Å]2.6502.650
Rmerge0.1360.830
Number of reflections17149
<I/σ(I)>27.13
Completeness [%]100.0100
Redundancy28.128.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729123% PEG 3350, 100 mM Bis-Trispropane, pH 7.0, 80 mM Mg-acetate, VAPOR DIFFUSION, SITTING DROP, temperature 291K

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PDB entries from 2024-10-30

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